Beauveria recombination genomics analyses

Supporting information for the paper 'Lack of recombination among sympatric isolates of Beauveria bassiana provides evidence for a diverse cryptic species complex'. We investigated the extent of recombination among isolates of Beauveria bassiana to assess whether sexual reproduction occurs among them in nature, and infer whether non-outcrossing population may represent cryptic species. We sequenced and assembled genomes of 14 isolates collected from soil in Queensland, Australia, and each was genotyped at their mating-type locus. We reconstructed a phylogeny from sequences of B. bassiana available on the NCBI SRA database and those generated in this study. Mitochondrial alignment - Mitochondrial.phy Mitochondrial partition file - Mitochondrial.phy.splits.nex Nuclear genome alignment - BB14_SRA42_filtered_recode_min4.phy Thinned and LD pruned VCF file used for structure analysis - BBAS14_filtered2_thin1k_LDpruned.vcf VCF file of 14 isolates from Queensland and 42 from NCBi - BB14_SRA42_filtered2.recode.vcf VCF file of 14 isolates from Queensland - BBAS14_filtered2.recode.vcf