This is the anvi'o essential files for the reanalysis of the genome published in http://www.nature.com/nature/journal/vnfv/ncurrent/full/nature16461.html.
This dataset contains the Phase I analysis output from Effectidor2, used for the refinement and classification of predicted Type III secreted effectors (T3SEs) across 57 Pseudomonas syringae ge
Example input database of custom genome collection for MIDAS2 protocols. Two genomes from two species (Staphylococcus epidermidis and Streptococcus mutans )
aSource is as follows: P. Fratamico, Eastern Regional Research Center, Agricultural Research Center, Agriculture Research Service, U.S. Department of Agriculture, Wyndmoor, Pennsylvania;bNT: not teste
