Antibiotics under our feet: investigating the presence of ESKAPE bacteria and other human pathogens in our urban soil samples

This dataset consists of a Krona chart visualisation of our bioinformatics results for our first six soil samples sent for DNA sequencing. The Krona chart was used to determine if ESKAPE pathogens or other human pathogens were present in our soil samples. A spreadsheet of the results together is included. Two tables to display the results (ESKAPE pathogens, other human pathogent) were produced and are presented here in .mp4 video format that can be paused to view results for each soil sample. The data analysis for this part of the "Antibiotics under our feet" was carried out in collaboration with a Nuffield Research Placement student at the University of St Andrews during the summer of 2022. The Nuffield project protocol with instructions for analysing the Krona chart to gather data is included.