Data accompanying MetaChrom and "Annotating functional effects of non-coding variants in neuropsychiatric cell types by Deep Transfer Learning"

This is the data accompanying the paper " Annotating functional effects of non-coding variants in neuropsychiatric cell types by Deep Transfer Learning" and the GitHub repository https://github.com/bl-2633/MetaChrom. /data/bed_files/ contains the unprocessed bed file used in analysis /data/seq_data/ contains processed data from the bed files with corresponding partition and labels for each sequence segment. /trained_model/MetaChrom_model/ contains the pre-trained MetaChrom model on neural developmental context /trained_models/MetaFeat_model/ contains the MetaFeat model used in training /tool/ contains files and software necessary for the processing pipeline.