Additional file 7:Co-expressed gene pairs have more Hi-C interactions than all pairs. T tests are used to test the difference between Hi-C interactions of co-expressed gene pairs and all pairs. In co-

DataCite Commons2024-02-16 更新70

Additional file 5 of Modeling and analysis of Hi-C data by HiSIF identifies characteristic promoter-distal loops

基因组学

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Additional file 5. Significant interacting fragments called by HICCUPS in K562 cells.

DataCite Commons2024-02-14 更新60

Additional file 1 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C

基因组学

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Additional file 1: Table S1. Datasets used in this study. (A) data availability (B) QC statistics of Micro-C, Hi-C, and promoter capture Micro-C data (C) Additional metrics of promoter capture Micro-C

DataCite Commons2023-04-13 更新100

In Situ Chromatin Interaction Analysis Using Paired‐End Tag Sequencing

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转录调控

In situ ChIA-PET, fastq files for testing bioinformatic pipeline. Library ID: LDK0004-L Sequencing platform: Miseq-2X150bp Cell line: KC167 IP-factor: RNAPII Reference genome, as a suggestio

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Additional file 19 of Loop Catalog: a comprehensive HiChIP database of human and mouse samples

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