Additional file 5 of Diversity in Aβ deposit morphology and secondary proteome insolubility across models of Alzheimer-type amyloidosis

Additional file 5: Table S4. Excel spreadsheets that list the identity and spectral count data for the SDS-insoluble proteins identified from each model using SAINT score analysis. Each model is tabulated independently. The first tabs labeled “Raw spectra count, Removed duplicates, bait, prey, and inter” are the raw data exported from Scaffold and the intermediate steps of SAINT score calculations. SAINT scores were generated by SAINTexpress as described in Methods. The last 7 tabs are the identified proteins listed according to the genotypes. Any SDS-insoluble data with spectra counts less than 5 were removed, and only proteins with SAINT probability scores equal to or higher than 0.9 were counted as over-represented. This file contains the data used to generate Fig. 6.