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Chelonid Herpesvirus 5 (ChHV5) genomic sequences obtained through long-range PCR and high throughput sequencing from Florida and Hawaii green sea turtles with fibropapillomatosis

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U.S. Geological Survey2018-01-01 更新2026-04-23 收录
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资源简介:
The files in this data release are the processed DNA consensus sequence alignment files for the chelonid herpesvirus 5 (ChHV-5) genome plus 66 open reading frames representing protien-coding genes. DNA was extracted from tumor biopsies from green sea turtles (Chelonias mydas) with fibropapillomatosis sampled from Florida and Hawaii coastal waters. We used high-throughput short-read sequencing (Illumina MiSeq and Ion Torrent Personal Genome Machine) of long-range PCR products amplified from tumor tissue using primers designed from the single available ChHV5 reference genome from a Hawaii green sea turtle. The raw sequence data is available at the NCBI Sequence Read Archive under bioproject number PRJNA360405, including biosample numbers SAMN06210144- SAMN06210150.
创建时间:
2018-01-01
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