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Genome and transcriptome of parasite plants Orobanchaceae

NIAID Data Ecosystem2026-03-11 收录

寄生植物基因组进化

列当科比较基因组学

数据链接：

https://www.ncbi.nlm.nih.gov/sra/DRP003426 数据链接链接失效反馈

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资源简介：

This project provide genomic DNA and mRNA sequences from 5 species (Aeginatia indica, Orobanche minor, Pedicularis keiskei, Phtheirospermum japonicum and Melampyrum roseum) in a parasite plant family, Orobanchaceae, in order to study genome evolution.

应用场景：

创建时间：

2020-04-09

寄生植物基因组进化

基因家族转座动态

Certain types of gene families, such as those encoding most families of transcription factors, maintain their chromosomal syntenic positions throughout Angiosperm evolutionary time. Other, non-synteni

DataONE2011-12-19 更新90

Global transgenerational gene expression dynamics in two nascent allohexaploid wheat lines analogous in genome constitution to common wheat (Triticum aestivum)

多倍体小麦基因组

寄生植物基因组进化

Alteration in gene expression accompanying initial stages of allopolyploidy is a prominent feature in plants, but its spectrum and model are highly idiosyncratic. We used multi-colour GISH to identify

NIAID Data Ecosystem70

The datasets supporting the conclusions of this article "Multi-omics analyses reveal transposon-associated genomic evolution and regulatory rewiring in barley"

寄生植物基因组进化

多组学分析

This datasets support the main conclusion of the study “Multi-omics analyses reveal transposon-associated genomic evolution and regulatory rewiring in barley.” It includes normalized expression matric

Figshare2026-03-07 更新30

Ancestral karyotype reconstructed for Malvaceae

寄生植物基因组进化

共线性分析

These data can be used for ortholog inference, synteny detection and karyotype mapping with WGDI/MCscanX/Orthofinder/SOI etc.PMK: proto-Malvaceae karyotypetPMK: translocated PMK*.gff: gene coordinates

Figshare2025-07-17 更新70

Whole-Genome Duplication and Acceleration of Molecular Evolution are Associated with the Early Diversification of Cornus L. (Cornaceae): Insights from De Novo Assembled Transcriptome Sequences

寄生植物基因组进化

全基因组复制效应

Here we compare ten de novo-assembled transcriptomes representing the major lineages of the angiosperm genus Cornus (dogwood) and relevant outgroups using a customized pipeline for analyses. Using thr

NIAID Data Ecosystem40

Genome and transcriptome of parasite plants Orobanchaceae

资源简介：

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