Data and code to reproduce Dallas, Park, and Drake "Predicting cryptic links in host-parasite networks"

This repository contains code and data to reproduce the analyses and create figures from: Dallas, T, AW Park, and JM Drake. 2017. "Predicting cryptic links in host-parasite networks". PLoS Computational Biology. The RData file (`Dallas2017.RData`) contains files necessary for the phylogenetic analyses, and contains the mammal supertree from: Bininda-Emonds, Olaf RP, et al. "The delayed rise of present-day mammals." Nature 446.7135 (2007): 507-512. For more details on the analyses presented here, please see the original publication.本仓库包含可复现相关分析并生成绘图的代码与数据：Dallas T、Park AW与Drake JM于2017年发表于《PLOS计算生物学（PLoS Computational Biology）》的《预测宿主-寄生网络中的隐秘关联（Predicting cryptic links in host-parasite networks）》。其中`Dallas2017.RData`文件包含系统发育分析所需的配套数据，同时收录了Bininda-Emonds Olaf RP等学者2007年发表于《自然（Nature）》第446卷第7135期、页码507至512的论文《现代哺乳动物的崛起延迟（The delayed rise of present-day mammals）》中的哺乳动物超树数据。如需了解本次分析的更多细节，请参阅原始研究论文。