Genome sequence assembly of the Brazilian mangaba fruit (Hancornia speciosa)
收藏DataCite Commons2025-06-01 更新2024-08-18 收录
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https://figshare.com/articles/dataset/Genome_sequence_assembly_of_the_Brazilian_mangaba_fruit_Hancornia_speciosa_/20767777/1
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资源简介:
A genome sequence assembly of the Brazilian mangaba fruit (Hancornia speciosa). We generated raw subreads using Pacbio Sequel II from DNA extracted out of a single individual. Canu v1.8 pipeline was used to perform read correction and read trimming resulting in nearly 50x sequencing coverage of the expected haploid DNA content of 430 Mb. Unitig construction resulted in a total of 3,447 consensus sequences larger than 5kbp, totaling 417 Mbp with NG50 value of 0.66 Mbp. This dataset contains the FASTA formatted file and basic sequence-level statistics calculated on the basis of the script assemblathon_stats.pl (github.com/ucdavis-bioinformatics/assemblathon2-analysis) and some metadata on sequences generated by the Canu program.
提供机构:
figshare
创建时间:
2023-08-25



