Running time of SHRiMP for mapping 500,000 35 bp SOLiD <i>C. savignyi</i> reads to the 180 Mb reference genome on a single Core2 2.66 GHz processor.
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In all cases, two k-mer hits were required within a 41 bp window to invoke the vectorized Smith-Waterman filter.
创建时间：
2013-02-21
