Summary of results from de novo assembly with Trinity, SOAPdenovo-trans and Trans-ABySS software.
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Trinity outperformed all assemblers with default k-mer. The best result with SOAPdenovo-trans was obtained with k-mer length 47 and T.ABySS yielded longer contigs using ‘trans k-mer’.MS = Mean size (bp).L50 = Minimum contig length (bp) representing 50% of the assembly.N50 = Minimum number of contigs representing 50% of the assembly.
创建时间：
2015-12-02
