CNP0001986 gVCFs part 1
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资源简介：
Sequencing reads were aligned to the Amel_HAv3.1 reference genome using BWA-MEM v0.7.17. Reads were sorted with SAMtools v1.9 and duplicates marked (MarkDuplicates) with GATK v4.0.11.0. Variants for each sample were called using GATK’s HaplotypeCaller with the following non-default parameters --ERC GVCF, --sample-ploidy 2 and -A AlleleFraction. This dataset comprises the gVCF files for a subset of <strong>diploid</strong> samples from Chen <em>et al</em>. (2022), belonging to project accession: CNP0001986.
提供机构：
Talenti, Andrea; Barnett, Mark; Wragg, David; Richardson, Matthew; Parejo, Melanie; Vignal, Alain创建时间：
2022-07-07
