Supplement 2. Parameter values and statistics for the disturbance ZIP models (excluding latitude and longitude) for eight animal guilds.

File List ZIP_dist_results.txt Description Parameter values and statistics for the disturbance ZIP models (excluding latitude and longitude) for eight animal guilds. Guild is the animal guild, abbreviated as Ape (apes), Bird (insectivorous birds), Duik (duikers), Ele (elephant), Fbird (large frugivorous birds), Mky (monkeys), Pig (forest pigs), and Squ (squirrels). Effects of explanatory variables (in the Parameter column) are estimated for the two parts of the mixture model. Parameters with the prefix b0 are effects of the absence part of the ZIP model quantifying the probability of a structural zero: these effects are on the logit scale. Parameters with the prefix b are effects for the abundance part of the model: these effects are guild densities. Explanatory variables include: frt (fruit abundance); pca1 (PCA axis 1 – number of trees); pca2 (PCA axis 2 – number of lianas); pca3 (PCA axis 3 – understory); pco (canopy heterogeneity); site (different forest types) where [1] = logged, hunted forest, [2] = logged, unhunted forest, [3] = unlogged, unhunted forest. The standard deviation of the month × species random effect is sigma.mo. From the estimated explanatory variables and the data, we calculated: post.p as the probability that the observations along a transect come from a Poisson distribution for each site; post.lambda as the predicted guild density generated from a Poisson distribution for each site; and post.abund as the mean guild density for each site. For each parameter value, we list the mean (Mean), standard deviation (SD), the Monte Carlo standard error of the mean (MC error), and the 2.5%, 50% (Median), and 97.5% quantiles for each parameter.