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4C-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci

ChEBI2014-04-28 更新2026-07-21 收录

染色质构象

Hox基因

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-55342 数据链接链接失效反馈

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资源简介：

4C-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci

应用场景：

创建时间：

2014-04-28

染色质构象

发育基因调控

We designed 4C-Seq experiments for hoxa13a, hoxa13b and hoxd13a promoters in three developmental stages in zebrafish embryos: 24, 48 and 60 hpf. 4C-seq samples for three different hox13 genes promoter

NIAID Data Ecosystem60

Genome wide SMC1-mediated chromatin looping changes in shBORIS and shLUC resistant Kelly cells.

染色质构象

神经细胞表观遗传学

We performed SMC1-mediated ChIA-PET analysis in both shBORIS and shLUC resistant Kelly cells. Overall design: SMC1 ChIA-PET data from shBORIS and shLUC resistant Kelly cells were generated by deep seq

NIAID Data Ecosystem30

Additional files for Lexa et al. HiC-TE publication

染色质构象

转座元件研究

Additional files for Lexa et al. HiC-TE publication Suplementary Figures HiC-TE manual Suplementary Tables PDF files with 6 complete sets of outputs, numbered by SRR ID and the name of output

Zenodo2022-06-29 更新00

ChIA-PET from GM19240 (ENCSR782XOF)

染色质构象

遗传学数据

H3K27ac ChIA-PET in GM19240 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Use

NIAID Data Ecosystem30

Nuclear Organization of Lens Epithelium and Fiber Cells in Newborn Lens

晶状体细胞分化

染色质构象

Cellular differentiation is marked by temporally and spatially coordinated gene expression regulated at multiple levels within the nucleus. Sequence-specific DNA-binding transcription factor CTCF EDIT

NIAID Data Ecosystem10

4C-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci

资源简介：

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