DIAMOND 0.9.24 taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly

Taxonomic binning of the gold standard pooled assembly<br> <strong>Software: </strong>DIAMOND<br> <strong>SoftwareVersion: </strong>0.9.24<br> <strong>DataURL: </strong> https://data.cami-challenge.org/participate<br> <strong>SoftwareURL:</strong> https://github.com/bbuchfink/diamond<br> <strong>ReferenceDatabase:</strong> NCBI nr 2019-04-17<br> <strong>Taxonomy:</strong> NCBI 2019-04-17<br> <strong>ShortReadsUsed:</strong> False<br> <strong>LongReadsUsed:</strong> False<br> <strong>CommandUsed:</strong> diamond makedb --in nr.faa.gz --db nr --taxonmap prot.accession2taxid.gz --taxonnodes nodes.dmp<br> diamond blastx --query anonymous_gsa_pooled.fasta --db nr --outfmt 102 --out 19122017_mousegut_scaffolds.out --block-size 40 --index-chunks 1 --tmpdir tmp