Additional file 5 of Transcriptome of the synganglion in the tick Ixodes ricinus and evolution of the cys-loop ligand-gated ion channel family in ticks

Additional file 5: Table S5. Lists of differentially expressed genes with their annotation and read counts for all libraries. Columns: Gene ID in the meta-transcriptome, Best BLASTX hit against the SwissProt database, Best BLASTX hit on theUniref90 database, list of GO terms associated, normalized reads counts in Fragments per Kilobase per Million reads (FPKM) for each libraries (Synganglion or Whole Body, Fed or Unfed ticks, as precised by the column title. Below each each library name, the terms «Up», «Down» or «NI» respectively indicate up-regulation, down-regulation, or that the library was not included in the statistical analysis. Sheet A (A – Syn+ genes): comparison between the synganglion and whole body libraries, n=8483 genes up-regulated in the synganglion. Sheet B (B – Syn- genes): comparison between the synganglion and whole-body libraries, n=5040 genes down-regulated in the synganglion. Sheet C (C – Fed+ genes, Syn libraries only): comparison between the synganglion of fed ticks and the synganglion of unfed ticks, genes up-regulated in fed ticks. Sheet D (D – Fed- genes , Syn libraries only): comparison between the synganglion of fed ticks and the synganglion of unfed ticks, genes down-regulated in fed ticks.