Prediction accuracy for a disease with population or case-control samples when true proportion of variance explained by the set of SNPs on the liability scale is 0.5, prevalence is 0.01 and τ = N/M varies.
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https://figshare.com/articles/dataset/_Prediction_accuracy_for_a_disease_with_population_or_case_control_samples_when_true_proportion_of_variance_explained_by_the_set_of_SNPs_on_the_liability_scale_is_0_5_prevalence_is_0_01_and_964__N_M_varies_/776533
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Exp1: Expected value from equation (2) or equation (6) of Daetwyler et al. (2008).Exp2: Expected value from equation (9) of Daetwyler et al (2008).Exp3: Expected value from equation (3).Est: Average of estimates from 100 replicates.se: Empirical standard error over 100 replicates.Proportion of cases in case-control study is P = 0.5.
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2015-12-02
