Differential gene and isoform expression analysis (cell types).

Shown are the associations between the expression of each expressed gene and isoform and cell type proportions in all bulk RNA-seq CVS samples. For each gene and isoform, we report: isoform ID, gene ID, gene name; the cell type whose proportion is tested for association with expression; effect size, standard error, p-value (linear regression: lm function in R), FDR correction (Bonferroni); whether the expression of the gene or isoform is associated with cell type proportion (FDR < 0.05 and effect size > 0). Only differentially expressed genes and isoforms are reported (FDR < 0.05). The differential expression analysis of all genes and isoforms can be found at https://doi.org/10.6084/m9.figshare.13537343.
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