Data (2) with paper "Size Laws and Division Ring Dynamics in Filamentous Escherichia coli cells"

See also: https://zenodo.org/records/11401115

Data files related to manuscript:

Wehrens M, Ershov D, Rozendaal R, Walker N, Schultz D, Kishony R, Levin PA, Tans SJ (2018). “Size Laws and Division Ring Dynamics in Filamentous Escherichia coli cells”. Current Biology.

https://doi.org/10.1016/j.cub.2018.02.006

Scripts are available at:

https://github.com/TansLab/Tans_filamentation

And you will also need the additional scripts from the repositories:

https://github.com/TansLab/Common_libraries

https://github.com/TansLab/Tans_Schnitzcells

Script that generates figures:

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

And more specifically, data is loaded, (partially analyzed,) and plotted here:

https://github.com/TansLab/Tans_filamentation/blob/master/script20160429_filamentRecoveryDivisionRatioss.m

Figure 3

See also

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

https://github.com/TansLab/Tans_filamentation/blob/master/script20160422_filamentRecoveryFtslabelLocations.m

Related files:

Data files for cell morphology properties

2016-04-07_FilaRecovery_asc777/pos2crop/data/pos2crop-skeletonData.mat

2016-04-07_FilaRecovery_asc777/pos3crop/data/pos3crop-skeletonData.mat

Data files with fluorescence data

2016-04-07_FilaRecovery_asc777/pos2crop/analysis/straightenedCells/2016-04-07pos2crop_straightFluorData.mat

2016-04-07_FilaRecovery_asc777/pos3crop/analysis/straightenedCells/2016-04-07pos3crop_straightFluorData.mat

Data files with division and lineage data (also supplied above)

2016-04-07_FilaRecovery_asc777/pos2crop/data/pos2crop-Schnitz.mat

2016-04-07_FilaRecovery_asc777/pos3crop/data/pos3crop-Schnitz.mat

Supplemental figure with nucleoid data

See also

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

https://github.com/TansLab/Tans_filamentation/blob/master/script20160422_filamentRecoveryFtslabelLocations.m

Related files:

Data files for cell morphology properties

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/pos1cropd-skeletonData.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/data/pos1cropa2-skeletonData.mat

Data files with fluorescence data

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/analysis/straightenedCells/2017-11-08pos1cropd_straightFluorData.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/analysis/straightenedCells/2017-10-12pos1cropa2_straightFluorData.mat

Data files with division and lineage data (also supplied above)

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/pos1cropd-Schnitz.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/data/pos1cropa2-Schnitz.mat

Lookup data file: 2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/slookup.mat