Gut Analysis Toolbox: Data and code associated with JCS manuscript

The data and python code in jupyter notebooks are associated with the manuscript: Sorensen et al. Gut Analysis Toolbox: Automating quantitative analysis of enteric neurons. J Cell Sci 2024; jcs.261950. doi: https://doi.org/10.1242/jcs.261950 FigS1_analysis.zip: Data files (csv) and jupyter notebooks (ipynb) pertaining to Fig. S1D,E. Fig3_analysis.zip: Data files (csv) and jupyter notebooks (ipynb) pertaining to Fig. 3D-N. The images and analysis files associated with analysis in GAT are also uploaded: CalR_CalB_GAT_analysis.zip The images used in this analysis are from EXP174 in this dataset: https://zenodo.org/records/7236748