Additional file 1 of Whole-genome methylation analysis of testicular germ cells from cryptozoospermic men points to recurrent and functionally relevant DNA methylation changes

Additional file 1. Table S1: Clinical parameters. Table S2: Primers for generating amplicons for targeted bisulfite-sequencing. Table S3: MEST, H19, XIST and DDX4 methylation values obtained by DBS for the testicular sperm samples. Table S4: WGBS statistics. Quality control parameters were based on QualiMap and MethylDackel reports. Table S5: WGBS methylation values for the 50 imprinting controls regions. Table S6: High-confidence TGC unmethylated regions. Table S7: High-confidence TGC low-methylated regions. Table S8: WGBS methylation values for the 1329 DMRs. Table S9: Annotations for the 271 CTR-CZ DMRs. Table S10: DMR-associated genes. Table S11: Differentially expressed DMR-associated genes using tradeSeq. Table S12: Differentially expressed DMR-associated genes using MAST.