Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP datasets
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Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP epigenomics datasets, to accompany paper Lynall et al 2021 Accompanying code available at https://github.com/maryellenlynall/psychimmgen2021 Active regulatory elements annotations are a union of the following IDEAS annotations, representing enhancers and active promoters (see http://bx.psu.edu/~yuzhang/Roadmap_ideas/trackDb_test.txt for IDEAS track hubs): 4_Enh<br> 6_EnhG<br> 8_TssAFlnk<br> 10_TssA<br> 14_TssWk<br> 17_EnhGA tissues.txt provides the list of ROADMAP tissues The partitioned_LD_scores folder contains partitioned LD scores in a format suitable for stratified LDSC analysis for European participants
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2021-08-02
