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Neural-network-based molecular dynamics simulations reveal that proton transport in water is doubly gated by sequential hydrogen-bond exchange: Neural network potentials training data

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NIAID Data Ecosystem2026-05-02 收录
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https://zenodo.org/record/11965259
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Neural network potentials of an excess proton in bulk water, training data This dataset contains 2188 configurations labeled at two hybrid DFT levels (revPBE0-D3 and B3LYP-D3). The configurations are given as a single XYZ file: configurations.xyz The box dimensions are written in box.txt The energies for all configurations at a given level of theory are written in energies_LEVEL.txt (one configuration per line) The atomic forces for each configuration at a given level of theory are gathered in a XYZ file: forces_LEVEL.xyz The relative displacements of the Wannier centroids, with respect to the closest oxygen atom, for each configuration at a given level of theory, are in the following XYZ file: wannier-centroids-displacements_LEVEL.xyz
创建时间:
2024-09-10
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