Additional file 27 of Proteogenomic insights into the biology and treatment of pancreatic ductal adenocarcinoma

Additional file 27: Table S5. 8p11.22 Amplification Associated with PDAC Metastasis. Table S5A The matrix describing mutations in PDAC metastatic patients and non-metastatic patients. Table S5B Matrix of GSVA scores of pathways significantly altered in PDAC metastatic patients and non-metastatic patients, proteome level. Table S5C Matrix of xCell signatures significantly altered in PDAC metastatic patients and non-metastatic patients, transcriptome level. Table S5D Matrix describing the cis-effects of genes located on chromosome 8p11.22. Table S5E Matrix describing the expression of ADAM9-interacting proteins in PDAC metastatic patients and non-metastatic patients. Table S5F Relative abundance of WNT-signaling-related proteins and phosphosite. Table S5G MS matrix of protein groups and their relative intensities in Scrambled siRNA and ADAM9 KD groups. Table S5H List of interacting proteins of ADAM9 identified by immunoprecipitation assay. Table S5I WGCNA analysis showing module-trait relationships in PDAC patients with five different metastasis sites. Table S5J Protein expression in metastatic site-specific modules.