Nanopore long reads enable the first complete genome assembly of a Malaysian Vibrio parahaemolyticus isolate bearing the pVa plasmid associated with acute hepatopancreatic necrosis disease

Supplemental File 1: Main genome assemblies (Unpolished Flye assembly, Polished Flye assembly, Unicycler Hybrid Assembly and Unicycler Illumina-only assembly) generated in this study for comparison and their BUSCO output. Supplemental File 2: Phyre2 protein modelling output of the putative MVP1 TcdA toxin Supplemental File 3: Phyre2 protein modelling output of the putative MVP1 TcdB toxin Supplemental File 4: Phyre2 protein modelling output of the putative MVP1 TccC toxin Supplemental File 5: InterProScan output of the NCBI-predicted MVP1 proteome. Supplemental Table 1: NCBI BlastN output using the <em>fuc</em> genes of <em>Vibrio parahaemolyticus</em> MVP1 as the query to search against the Vibrio reference WGS database as of 21 Oct 2019