Diversity of lake bacteria is important for human enterovirus inactivation

This repository contains datasets used in the publication by Romanenko, Peter and Kohn 2024. 

The "species_table.cs" file contains the abundances of bacterial species in the different samples.

The "metadata.csv" file contains the sample identifiers, sampling season, dilution, rate constants for loss of viral infectivity (ki) and for genome decay (kg), as well as various diverstiy metrics.

The "taxonomy.csv" file contains taxonomic information of the species listed in the species table.

The "infectivity loss and genome decay.xlsx " file contains raw measurements of infectivtiy measured using the MPN assay (infectivity) and the dPCR assay (genome decay). log10-fold changes after 96 h as well as ki and kg are also available in this file.