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Input data for predicting miRNA target genes

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Figshare2024-10-09 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Input_data_for_predicting_miRNA_target_genes/27191259/1
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This .zip file contains the input files needed for predicting miRNA target genes, which are:miRNA expression data for all the cancer types in TCGA, and was downloaded from TCGA Genomic Data Commons (https://portal. gdc.cancer.gov/).gene expression data for for all the cancer types in TCGA, downloaded from uscs xena. (https://xenabrowser.net/datapages/?dataset=EB++AdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.xena&host=https://pancanatlas.xenahubs.net&removeHub=https://xena.treehouse.gi.ucsc.edu:443)a TCGA sample sheet provides metadata that includes information about each sample, such as the unique barcode for the sample, its associated cancer type.a preprossed known miRNA-target genes data, which was obtained from 5 miRNA targets databases (mir2Disease, miRecords, TarBase, miRTarBase, and TargetScan)
提供机构:
Lin, Shuting
创建时间:
2024-10-09
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