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Datasets and codes for paper "Patient stratification based on a pan-cancer tumor microenvironment atlas"

NIAID Data Ecosystem2026-05-01 收录

肿瘤微环境分析

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数据链接：

https://zenodo.org/record/10511626 数据链接链接失效反馈

官方服务：

资源简介：

These data will be accessible upon publication.

应用场景：

创建时间：

2024-01-15

相关数据集

UTUC.h5ad

肿瘤微环境分析

成像质谱

Processed human upper tract urothelial carcinoma (UTUC) IMC dataset from Ohara et al. ( Nat Commun , 2024), containing 16 images with manually annotated topological domain labels.

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Tri-cultures of HGSOC cells replicate tissue remodelling observed in biopsies.

卵巢癌疾病建模

肿瘤微环境分析

We built novel tri-cultures of HGSOC cells with human primary omental adipocytes and fibroblasts which replicated tissue remodelling and matrisome production observed in biopsies. RNAseq analysis show

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Additional file 1 of An immune responsive tumor microenvironment imprints into PBMCs and predicts outcome in advanced pancreatic cancer: lessons from the PREDICT trial

肿瘤微环境分析

癌症预后预测

Additional file 1: Supplementary Tables S1–S13 supporting the data presented in the main text

Figshare2025-07-22 更新20

Additional file 15 of Single-cell RNA-seq reveals the genesis and heterogeneity of tumor microenvironment in pancreatic undifferentiated carcinoma with osteoclast-like giant-cells

单细胞RNA测序

肿瘤微环境分析

Additional file 15: Table S7. DEGs of clusters 3 in figure 3 at the resolution of 0.1.

Figshare2024-02-13 更新30

Reversion analysis reveals the immunogenicity in vivo of a poorly MHC I-binding cancer neoepitope

肿瘤免疫原性

肿瘤微环境分析

A mutation that results in tumor rejection activity in a neoepitope (which is a poor binder of Kd) influences the immunogenicity of the tumor as a whole. Our results demonstrate the activity in vivo o

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