Additional file 2: Table S1. of High-throughput sequencing of pituitary and hypothalamic microRNA transcriptome associated with high rate of egg production

The main reproductive traits of the selected LP and HP samples. Table S2. Primer sequences for real-time PCR validation and SNP detection. Table S3. Overview of miRNA-seq data of all samples. Table S4. Identities of various RNA sequences in pituitary and hypothalamic tissues. Table S5. Expression profile of known miRNAs in pituitary and hypothalamic tissues of low- and high-rate egg production chickens. Table S6. Novel miRNAs expressed in pituitary and hypothalamus tissues of low- and high-rate egg production chickens. Table S7. The distribution of miRNA pairs in pituitary and hypothalamic tissues. Table S8. Differentially expressed miRNAs between low- and high-rate egg production chickens in pituitary and hypothalamic tissues. Table S9. The prediction of the differentially expressed miRNA targets in pituitary and hypothalamic tissues. Table S10. GO and KEGG pathway annotations for the miRNA targets in pituitary and hypothalamic tissues. Table S11. miRNAs and their predicted target genes involved in the regulation processes of reproduction. Table S12. Differentially expressed genes between low- and high-rate egg production chickens in pituitary and hypothalamic tissues. Table S13. The predicted miRNA-target pairs that are differentially and reciprocally expressed in pituitary and hypothalamic tissues. Table S14. The haplotype distribution and sequence variations in the selected miRNA precursors. (XLSX 1731Â kb)