Additional file 1 of Holo-omics analysis reveals the influence of gut microbiota on obesity indicators in Jinhua pigs

Additional file 1: Supplementary Table 1. Phenotype. Supplementary Table 2. Two Sample Group t Test. Supplementary Table 3. Alpha diversity. Supplementary Table 4. LEfSe(Line Discriminant Analysis (LDA) Effect Size. Supplementary Table 5. The basic statistics of mRNA-seq data. Supplementary Table 6. high-fatness and low-fatness differentially expressed genes (mRNA). Supplementary Table 7. Novel LncRNA information. Supplementary Table 8. Novel-circRNA.  Supplementary Table 9. Key gut tissue genes within each gut region that were significantly associated with indicators of obesity. Supplementary Table 10. Correlations of phenotype-related microorganisms with key genes. Supplementary Table 11. Estimated effect sizes from microbial linear regression models