Summary of discordances between outputs from SNAP (the 1000 Genomes reference) and the Illumina Cardio-Metabochip file.

NIAID Data Ecosystem100

Discordance (%) between imputed genotypes and actually observed genotypes at SNPs on Omni2.5 but not in the exome chip.

1Phase 1 of the 1KGP, consisting of 1,092 subjects.2Singapore Sequencing Malay Project, consisting of 96 Southeast Asian Malays that have been whole-genome sequenced at 30X.3Singapore Sequencing India

Figshare2015-12-02 更新20

Discordance rates between the imputed sequence data and the 600k array data depending on the used imputation pipeline.

基因型插补验证

遗传数据一致性分析

* For cells with a genotype call in STITCH itself, discordance rates were only 0.39% compared to 0.44 / 0.39% for HB-seq / HB-array for the same entries.

Figshare2021-12-23 更新10

Summary of discordances between outputs from SNAP (the HapMap 3 reference) and the Illumina Cardio-Metabochip file.

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Summary of discordances between outputs from SNAP (the HapMap 3 reference) and the Illumina Cardio-Metabochip file.

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