Additional file 14 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni
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Additional file 14: Supplementary Table 13. Biomphalaria sudanica protein domain location and Signal Peptides (SP) found among the initial candidates identified for the protein families C-type lectin-related protein (CREP), Fibrinogen-related protein (FREP) or galectin-related protein (GREP), determined by the presence of C-type lectin, fibrinogen (FBD) and Galectin like domains, respectively. For each examined protein it is detailed to which of the three families it is considered a candidate for, and the details of each domain and SP, the analysis that identified it, the signature accession, score (e-value or probability depending on the analysis, domain coordinates, InterPro v5.56-89.0 [52] annotation and description (if applicable), and what type of signature it was classified as: C-type lectin like domain, FBD like domain, Galectin like domain, IgSF like domain, other immunoglobulin like domain or a secreted protein. If the protein was utilized in the phylogenetic analysis it is indicated with an “X” in the Final Selection column, and “.” otherwise.
创建时间:
2024-02-19



