Simulated microbial sequencing data (WGS/HiC), 3C-contig graphs and clustering results.
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下载链接：
https://researchdata.edu.au/simulated-microbial-sequencing-clustering-results/938351
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资源简介：
Raw data associated with the manuscript:
DeMaere, Matthew Z., and Aaron E. Darling. Deconvoluting simulated metagenomes: the performance of hard-and soft-clustering algorithms applied to metagenomic chromosome conformation capture (3C). No. e1974v1. PeerJ Preprints, 2016.
Contains a structured folder of raw data generated in simulation sweep as well as derivative analysis results.
Folders:
Data and derivative data and results
ref_data - initial basis data for community generation
comm_data - generated communities
hic_data - raw simulated HiC readsets
wgs_data - raw simulated WGS readsets and assembly contigs (A5 assembler)
map_data - associated LAST alignment, BWA-MEM BAM files and golden standards (truth)
graph_data - 3C-contig graphs in various formats for cluster analysis
cluster_data - clustering results and external index scorings (weighted Bcubed)
Final result tables
mcl.csv
louvain_hard.csv
oclustr.csv
srmcl.csv
louvain_soft.csv
提供机构：
University of Technology Sydney
