Raw Counts: A protocol for low-input RNA-sequencing of patients with febrile neutropenia captures relevant immunological information

Raw counts for scientific article: <em>"A protocol for low-input RNA-sequencing of patients with febrile neutropenia captures relevant immunological information"</em> Victoria Probst*¹, Lotte Møller Smedegaard*², Arman Simonyan¹, Yuliu Guo¹, Olga Østrup¹, Kia Hee Schultz Dungu²_,Nadja Hawwa Vissing²_,Ulrikka Nygaard²andFrederik Otzen Bagger¹ ^{*Shared first authorship} Data description: The raw counts are from 88 samples of 22 patients with leukaemia and suspected infection sequenced by a low-input protocol (Takara SMART-seq HT) (96% succeeded) and 15 of these were also processed by the standard protocol (Truseq). ^{CLI.CSV: Raw counts of control samples processed using a low input RNA sequencing protocol. 15 samples processed by the low-input protocol.} ^{CRNA.CSV: Raw counts of control samples processed using a standard RNA sequencing protocol. 15 samples processed by the standard protocol.} ^{FEB.CSV: Raw gene counts from patients. 88 samples processed by the low input protocol. 4 samples failed sequencing.}