Archived fastq files, data tables, BLAST alignments and scripts for the study "External DNA contamination and efficiency of bleach decontamination for arthropod diet analysis" by Huszarik et al. (2023) https://doi.org/10.1002/edn3.410
收藏Mendeley Data2024-03-27 更新2024-06-27 收录
下载链接:
https://figshare.com/articles/dataset/Archived_fastq_files_data_tables_BLAST_alignments_and_scripts_for_the_study_External_DNA_contamination_and_efficiency_of_bleach_decontamination_for_arthropod_diet_analysis_by_Huszarik_et_al_/21197788/2
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资源简介:
Includes all raw fastq files, fasta files as well as read abundance ASV tables and taxonomic presence/absence tables, sample ID information, and scripts for the DADA2 pipeline and BLASTn. File information: ASVdata_long_XX is the presence/absence information for each primer pair in long format (no longer ASV table) PresAbs_asv_table_XX is the annotated ASV table with presences marked as "1" where each ASV was detected in a sample TaxonReads_asv_table_XX is the ASV reads table with taxonomic information added to the ASVs BLAST_100hits_XX is the output of BLAST first 100 hits used to obtain taxonomic information for each ASV sequence and includes a comparison with the first 5 hits Additional ASV BLASTs.rar contains hits for ASVs with extra BLAST alignments BLASTinput.txt is the input command for BLASTn RAW_sequence_table_XX is the raw ASV table produced by the DADA2 pipeline, with reads of each ASV sequence present in each sample
创建时间:
2023-06-28



