Additional file 9 of The autophagy interaction network of the aging model Podospora anserina

Autophagy PPI network of P. anserina. This files contains the tabular representation of Fig. 3 and provides all underlying data of the constructed PPI network of autophagy. The network consists of all interactions from the prediction approach and the yeast two-hybrid analysis. It includes the ID of the interaction, the source ID, the target ID, and the score. This file also contains further information about the corresponding reference interactions. For each predicted interaction, the reference interaction from yeast and / or human with the corresponding publication, author, and interaction type is listed. In addition, the file contains the expression data which are depicted as expression profiles in Fig. 3. UniProt accession numbers were used as identifiers for proteins of yeast and human. The identifiers for P. anserina proteins were adopted from the P. anserina genome database. Species were distinguished by their NCBI taxonomy IDs: Homo sapiens (9606), Podospora anserina (5145) and Saccharomyces cerevisiae S288c (559292). (XLS 271 kb)