kaken2 database of tick genomes for host decontamination

kraken2 database of tick genomes (chromosome & mitochondrial sequences only). Used in Nephele pipelines for decontamination of metagenomic datasets from tick host reads. Database is supplemented with human genome. Contained are the following 14 tick genomes / assemblies. Only chromosome and mitochondrial reads were included. No masking was used to create the database. Species Assembly Name Accession Rhipicephalus microplus USDA_Rmic GCF_043290135.1 Amblyomma americanum ASM5285725v1 GCF_052857255.1 Dermacentor variabilis ASM5094787v1 GCF_050947875.1 Rhipicephalus sanguineus BIME_Rsan_1.4 GCF_013339695.2 Dermacentor andersoni qqDerAnde1_hic_scaffold GCF_023375885.2 Ornithodoros turicata ASM3712646v1 GCF_037126465.1 Dermacentor silvarum BIME_Dsil_1.4 GCF_013339745.2 Ixodes pacificus IXPA_v2 GCA_964199305.2 Dermacentor albipictus USDA_Dalb.pri_finalv2 GCF_038994185.2 Hyalomma asiaticum BIME_Hyas_1.3 GCA_013339685.2 Ixodes hexagonus IXHE_v2 GCA_964199285.2 Haemaphysalis longicornis BIME_HaeL_1.3 GCA_013339765.2 Ixodes persulcatus IXPE_v2 GCA_964199295.2 Rhipicephalus microplus BIME_Rmic_1.3 GCF_013339725.1