<b>Analysis of nearly 3,000 archaeal genomes from terrestrial geothermal springs sheds light on </b><b>interconnected biogeochemical processes</b><b> </b>

This dataset contains supplementary data for the analyses presented in:Yan-Ling Qi^*, Ya-Ting Chen^*, Yuan-Guo Xie, Yu-Xian Li, Yang-Zhi Rao, Meng-Meng Li, Qi-Jun Xie, Xing-Ru Cao, Lei Chen, Yan-Ni Qu, Zhen-Xuan Yuan, Zhi-Chao Xiao, Lu Lu, Jian-Yu Jiao, Wen-Sheng Shu, Wen-Jun Li^†, Brian P. Hedlund^†, Zheng-Shuang Hua^†. Analysis of nearly 3,000 archaeal genomes from terrestrial geothermal springs sheds light on interconnected biogeochemical processes (under review)<b>Dataset contents:</b><b>Archaea.treefile</b>:<b> </b>Archaeal phylogenomic tree of 53 concatenated conserved archaeal marker genes in newick format.<b>Hydrogenase.treefile</b>: The phylogenetic tree of hydrogenase in newick format.<b>Microbial networks.pdf</b>: Figures of co-occurrence networks between Archaea and Bacteria based on <i>rpS3</i> protein sequences in 48 thermoacidic (a) and 31 thermoalkaline (b) springs.<b><i>rpS3 </i></b><b>database</b><b>.fasta</b>: The curated database of <i>rpS3</i> protein sequences in fasta format.