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InsectDCT: Datasets for training and evaluating pipeline processing insect camera recordings

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Zenodo2026-07-18 更新2026-08-01 收录
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Contains the dataset for training and testing of models to detect and hierarchically classify taxa of primary arthropods in video or time-lapse camera recordings described in the paper: Kim Bjerge, Simon Wogram, Pau Enric Serra-Marin, Toke T. Høye, "InsectDCT: A generalised pipeline for detection, taxonomic classification, and tracking of insects in camera-trap recordings", 2026, bioRxiv, https://doi.org/10.64898/2026.07.07.736939 The zip files contain the needed files and directory structure to train the models in Python code published at: https://github.com/kimbjerge/insectDCT =================================================================Content of ZIP files for the training dataset (insect detection):================================================================= detectorColorYOLOV6.zip (51GB) and detectorMotionYOLOV6.zip (71GB) The ZIP files can be downloaded from: https://anon.erda.au.dk/cgi-sid/ls.py?share_id=AO4fCuU3fi Contains annotated images and labels in YOLO format: https://github.com/ultralytics/yolov5/issues/2293 The subfolders insects5Motion (Motion-enhanced images) and insects5Color (RGB images) contain: train/images: *jpg - images for trainingtrain/labels: *txt - YOLO format labels for trainingval/images: *jpg - images for validationval/labels: *txt - YOLO format labels for validation The images are collected from different projects, with each camera monitoring different backgrounds of vegetation: GreenRoof: AC-S?*.jpg - (1-5) 5 systems with 10 camerasGreenHouse: S?_[0|1]*.jpg - (1-4) (0-1) 4 systems with 8 camerasArthropods: *NAIM??*.jpg - (01-60) 48 camerasArthropods: *BOR??*.jpg - (01-05) 5 camerasPollWatch: PW_S?_*.jpg - (2,3,4) 5 systems with 10 camerasMAMBO: MB_*.jpg - (au, cirad, ecoinn, ufz) four countries (DK, FR, MT, DE) 10 camerasOrchard: OC_pi*.jpg - (8,10,12,15,20,26,28) six cameras The subfolders insects6Motion (Motion-enhanced images) and insects6Color (RGB images) contain: trainACSHQ/images: First iteration of selecting insect images in the ASCHQ recorded video clipstrainACSHQ/labelstrainACSHQ2/images: Second iteration of selecting insect images in the ASCHQ recorded video clipstrainACSHQ2/labels ACSHQ: PP_S??_*.jpg - (0-61) >25 different plants YOLO_yaml: contains the YAML files for training YOLO11. ============================================================Content of ZIP file for the test dataset (insect detection):============================================================ detectorTestV6.zip (35GB) The ZIP file can be downloaded from: https://anon.erda.au.dk/cgi-sid/ls.py?share_id=AO4fCuU3fi Color images and Motion-enhanced images (m): The images are collected from different projects, with each camera monitoring different backgrounds of vegetation: GreenHouse: testGreenH(m): GH_S?*.jpg - 8 camerasHeather: testHeather(m): HE_*.jpg - 25 camerasMAMBO: testMBO(m): MB_*.jpg - (ukceh, uva) MAMBO two countries (UK, NL) 5 camerasOrchard: testOrchard(m): OC_pi*.jpg - (10,11,12,13,16,17) 6 cameras with different dates from training dataPollWatch: testPollW(m): PW_S?_*.jpg - 5 systems with 10 camerasRT-Impact: testRTNI(m): RT_*.jpg - one cameraASCHQ: testACSHQ(m): PP_S??_*.jpg - >25 different plants YOLO_yaml: contains the yaml files for testing and validating YOLO11. ======================================================================Content of ZIP files for the training dataset (insect classification):====================================================================== classifierTrainV6.zip (4.5GB) GreenRoof: NI - 11 taxonomic groupsArthropod: NI2 - 69 taxonomic groupsMAMBO: NI2_MAMBO - 16 taxonomic groupsOrchard: Orchard - 59 taxonomic groupsSupplemented images: GBIF - 52 taxonomic groups of cropped insect images In total 80 taxonomic groups are present in the dataset see details: classifierDatasetV6.txt Every subfolder is named, where space separates names at the three hierarchical levels:<L1 label> <L2 label> <L3 label> L3 labels can contain one space for species and no space for genusEg: Order Family Species: Hymenoptera_bees Apidae Apis melliferaEg: Order Family Genus: Hymenoptera_bees Apidae Bombus ==================================================================Content of ZIP files for the test dataset (insect classification):================================================================== classifierTestV6.zip (202MB) MAMBO and Arthropod: NI2_MAMBO 67 taxonomic groupsOrchard: Orchard - 44 taxonomic groupsRT-Impact: RTNI - 21 taxonomic groups Every subfolder is named, where space separates names at the three hierarchical levels:<L1 label> <L2 label> <L3 label>

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2026-07-03
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