遇见数据集

Data accompanying "Synergistic degradation of fucoidans in the ocean"

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Zenodo2026-04-29 更新2026-05-26 收录
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The tables provided on this repository accompany the analysis presented in the Global_ocean_microbial_fucoidan_degrader_analysis GitHub repository. The analysis and these accompanying tables are a component of the manuscript 'Synergistic degradation of fucoidans in the ocean'.Description of tables: isolates.env_samples_detected.tsv.gz = information on the samples where isolate-matched references have been detected (including samples, data source, locations and the strategy used to match the isolate to a reference)The remaining tables encompass information on predicted fucoidan degrading species derived from the mOTUs database. Fucoidan degraders were defined as encoding at least 5 fucoidanase genes in their genome. motus.fucoidan_degraders.gene_annotations.tsv.gz = Annotations of genes encoded within fucoidan degrader species representative genomes (derived from mOTUs database). motus.fucoidan_degraders.PULs.tsv.gz = Polysaccharide Utilisation Loci annotations of fucoidan degrader species representative genomes motus.fucoidan_degraders.summary.tsv.gz = Summary of fucoidan degradation potential and taxonomic classification of fucoidan degrader species representative genomes motus.fucoidan_degraders.community_profiles.tsv.gz = Abundances of fucoidan degraders and co-occuring species (mOTUs) across ocean metagenomes For more information on the analysis, see the associated GitHub Repository - Global_ocean_microbial_fucoidan_degrader_analysis

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Zenodo
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2026-04-29
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