Data for "The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa"

Collection of data used in the study:<b><i>“The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa”</i></b>Find related code and input files descriptions in GitHub (future release)<b>Supplementary video and file information:</b><b>Supplementary Video 1. BEAP0066, floating form.</b> Video accelerated to x150 normal speed. Total time elapsed = 1.2 h.<b>Supplementary Video 2. BEAP0066, contact of subpseudopodia.</b> Video accelerated to x150 normal speed. Total time elapsed = 1.6 h.<b>Supplementary Video 3. BEAP0066, double-amoeba.</b> Video accelerated to x150 normal speed. Total time elapsed = 5.8 h.<b>Supplementary Video 4. BEAP0066, rings in solid medium.</b> Video accelerated to x300 normal speed. Total time elapsed = 2.9 h.<b>Supplementary File 1. </b>Newick tree for Figure 1.<b>Supplementary File 2. </b>Species used in the project with source and name abbreviation..<b>Supplementary File 3. </b>Genomes used for transcriptome decontamination.<b>Supplementary File 4. </b>Differentially expressed Pfam clans per taxonomic group.<b>Supplementary File 5. </b>Newick tree for Supplementary Figure 1.<b>Supplementary File 6. </b>Scanning electron microscopy additional images.<b>Supplementary File 7. </b>Transmission electron microscopy additional images.<b>Supplementary File 8. </b>Classification of COG categories in dictyostelids according to their relative similarity to Fungi or Amoebozoa.<b>BEAP0066_tsa_transcriptome.fasta. </b><i>Apostamoeba explorator</i> transcriptome.<b>BEAP0079_tsa_transcriptome.fasta.</b> <i>Vannella septentrionalis</i> transcriptome.<b>BEAP0066_proteome.fasta. </b><i>Apostamoeba explorator</i> proteome.<b>BEAP0079_proteome.fasta</b> <i>Vannella septentrionalis</i> proteome.<b>Apostamoebida_V4_diversity_trimmed_for_RAxML.fas</b> V4 alignments for Supplementary FIgure 1 (trimmed version used in RAxML)<b>Apostamoebida_V4_diversity_with_sequence_mask.fas</b> V4 alignments for Supplementary FIgure 1 (full alignment with the sequence mask)