TSS, TES and transcript abundances in the time-resolved dcDNA-Seq datasets and de novo clustering results.

This table consists of four sheets presenting EHV-1 gene-level abundances at multiple infection time points (1–48 hpi) along with their de novo clustering results. Each row includes the gene or its canonical TSS or TES, its preassigned kinetic class (IE/E/L/unknown), and the de novo cluster assignment. The columns labeled EHV-1_[Time]_[Rep] indicate viral read count–normalized abundances for each replicate (Rep) at the given time (Time). ● Sheet A: TSS-Only: Contains reads covering the canonical TSS, regardless of TES overlap. ● Sheet B: TES-Only: Contains reads covering the canonical TES, regardless of TSS overlap. ● Sheet C: Transcript Dynamics (TSS+TES): Contains only reads overlapping both the canonical TSS and TES. ● Sheet D: Non-Normalized: Contains all raw dcDNA-Seq counts, including TSS and TES. Empty fields represent cases where either the TSS or the TES did not overlap. (XLSX)