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Amyloid-like motifs in short N-termini of NLRs.

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Figshare2022-12-21 更新2026-04-28 收录
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Motif id indicates ranks in the MEME output. Motifs are grouped based on overlapping hits in NLRs and similar sequence patterns. Established and proposed motif annotation labels are given where applicable. L is the motif length. #NLR and #nei. indicate number of sequences with a given motif in short N-termini of NLRs and C-termini of their genomic neighbors, respectively. AC+ indicates a proportion of motif instances for which ArchCandy score is 0.56 or above. Major taxonomic branch including vast majority of NLRs with the motif is given. #eff. indicates total number of effector proteins (with established association to NLRs) [5] with a given motif in C-termini. #cooc. indicates number of sequences with a given motif in short N-termini of NLRs / C-termini of effector proteins cooccurring in the same strains (genome assemblies). #str. is a number of such strains with cooccurrence. Exp. indicates selected studies reporting experimental validation of some properties typical to ASM for a motif instance in a given family.
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2022-12-21
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