Additional file 1 of Genome-wide investigation of the LARP gene family: focus on functional identification and transcriptome profiling of ZmLARP6c1 in maize pollen

Additional file 1: Supplementary Table S1. Primers used in this study. Supplementary Table S2. Amino acid sequences of LARP proteins from eight plant species. Supplementary Table S3. Information on LARP proteins from eight plant species. Supplementary Table S4. Cis-acting elements in the promoter of LARP proteins in maize. Supplementary Table S5. Differentially expressed genes (FDR < 0.01) in Gene Ontology (GO) subcategories (q value < 0.05). Supplementary Table S6. Differentially expressed genes (FDR < 0.01) in the subset of genes involved in RNA binding and reproduction. Supplementary Table S7. Log-fold change and significance of differentially expressed genes in the subset of genes involved in pollen development. Supplementary Table S8. Log-fold change and significance of jasmonic acid, abscisic acid, and mRNA surveillance-related homologous genes detected in the pollen of the Zmlarp6c1::Ds and ZmLARP6c1-OE genotypes. Supplementary Table S9. FPKM of ZmLARP6s in RNA-seq.