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Gene database for Pseudomonas aeruginosa PAO1

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DataCite Commons2020-08-26 更新2024-07-27 收录
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https://figshare.com/articles/Gene_database_for_Pseudomonas_aeruginosa_PAO1/10271318
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<i>Pseudomonas aeruginosa </i>is a common soil bacterium with a versatile metabolism capable of degrading many organic compounds. More importantly, <i>P. aeruginosa </i>is recognized as an important opportunistic pathogen of humans. This contribution describes a gene database comprising the names and gene sequences of all genes in <i>Pseudomonas aeruginosa</i> PAO1 (Genbank accession number: NCBI Reference Sequence: NC_002516.2). Annotated genome file was downloaded from Genbank and parsed by an in-house MATLAB software to yield a database comprising gene names and gene sequences. Overall, the gene database of <i>P. aeruginosa </i>PAO1 should find use in applications investigating the multi-faceted biology and biotechnology applications of this Gram-negative bacterium. Note that many genes in the species remain unannotated and lack a three letter abbreviated gene name. <br><br>

铜绿假单胞菌(*Pseudomonas aeruginosa*)是一类常见土壤细菌,拥有多功能代谢特性,可降解多种有机化合物。尤为重要的是,该菌被公认为人类重要的条件致病菌。 本研究构建了一套涵盖铜绿假单胞菌PAO1菌株全部基因名称与序列的基因数据库,该菌株的GenBank登录号为NCBI参考序列:NC_002516.2。注释基因组文件从GenBank下载后,通过自研MATLAB软件进行解析,最终生成包含基因名称与序列的数据库。总体而言,这套铜绿假单胞菌PAO1基因数据库可用于探究这株革兰氏阴性菌多维度的生物学特性与生物技术应用。需注意,该物种中仍有诸多基因未完成注释,且缺乏三字缩写基因名。
提供机构:
figshare
创建时间:
2019-11-08
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