Geneset of the Sericostoma genome assembly
收藏DataONE2018-02-20 更新2024-06-25 收录
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Genes were predicted using ab initio and homology-based approaches. Augustus was used for ab initio predictions. For the homology-based approach, protein datasets from related species (Acyrthosiphon pisum, Camponotus floridanus, Nasonia vitripennis, Bombyx mori, and Tribolium castaneum) were aligned to the draft genome assemblies using BLASTp (cutoff: 10-5), and gene models were generated by GeneWise. A consensus gene set that merged ab initio and homology-based predictions was created using GLEAN.
The three resulting data files contain a table with summary information per predicted gene (Sericostoma_personatum_gapClosed.gene.gff), the predicted mRNA sequences (Sericostoma_personatum_gapClosed.gene.cds) and the predicted protein sequences ( Sericostoma_personatum_gapClosed.gene.pep).
创建时间：
2018-02-20
