Additional file 6 of Using expression data to fine map QTL associated with fertility in dairy cattle

Additional file 6: Table S5. Title: List of genes significantly differentially expressed between high- and low-fertility cows. Description: genes with a false discovery rate (FDR) < 0.05 were declared significant. ENSEMBL_gene_ID = Ensembl stable gene identifier, gene_name = gene name, chr = chromosome, start = start of gene in base pair (bp), end = end of gene in bp, logFC = logarithm of fold change, topGE = most significant variant in the gene expression GWAS (if there were more than one variant with the smallest p-value, we selected the variant that had the smallest p-value in the meta-analysis for calving interval), pGE = p-value in the gene expression GWAS, effectGE = effect estimated in the gene expression GWAS, pCI = p-value in the meta-analysis for calving interval, effectCI = Z-score estimated in the meta-analysis for calving interval).