C. elegans RNA Sequence for viral discovery
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https://datadryad.org/dataset/doi:10.7272/Q65Q4T1R
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资源简介：
Nucleic acid from two nematode species, C. elegans JU1580 (isolated from a
rotting apple in Orsay, France) and C. briggsae JU1264 (isolated from a
snail on a rotting grape in Santeuil, France) were prepared and
pyrosequenced on the Roche Titanium Genome Sequencer. Raw sequence reads
were filtered for quality and repetitive sequences as described in
"Natural and experimental infection of Caenorhabditis nematodes by
novel viruses related to nodaviruses" by F?©lix et al
(http://www.ncbi.nlm.nih.gov/pubmed/21283608). Two novel members of the
Nodaviridae viral family, Orsay nodavirus and Santeuil nodavirus, were
discovered in the the 15933 and 20,787 reads, respectively. 1046 Orsay
nodavirus reads were found in the C. elegans samples while 2492 Santeuil
nodavirus reads were identified in in the C. briggsae sample. The data are
provided in FASTA format.
提供机构：
Dryad
创建时间：
2014-06-12
