RNA sequencing data of mouse caecum tissue following different dietary treatments

Mice were fed either a semi-synthetic diet ('SSD'), or the same diet supplemented with the fiber inulin ('inulin'). Mice were then infected with Trichuris muris ('Tm'). Mice recevied the diets 14 days prior to infection. After infection mice either continued on their pre-assigned diet, or were swtiched to an alternative diet. Mice were killed at either 7 or 11 days post-infection